Insertion junction: CLIP2.040331_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040331
Chromosome:chromosome 8
Location:2464642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCGGAAATTGCTGGCACTGGCAAGCGACCGCACAACACCTATCAGTC
Internal bar code:AATATCGCTGTGAAGACTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1669
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTCGCTTTTTGCCAACG
Suggested primer 2:AGTCATGCCATGTGGGTCAG