Insertion junction: CLIP2.040331_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040331
Chromosome:chromosome 8
Location:2464644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCTAGCTGTGCGGCCCTTGAACGACGCGTCTCCCCGCCCCGGCCTCC
Internal bar code:AATATCGCTGTGAAGACTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:36.8421
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCATGCCATGTGGGTCAG
Suggested primer 2:TCACTCGCTTTTTGCCAACG