Insertion junction: CLIP2.040335_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040335
Chromosome:chromosome 2
Location:2170093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089400 HRP2 (1 of 12) 2.7.11.18 - [Myosin light-chain] kinase / Smooth-muscle-myosin-light-chain kinase; Hydroxyproline-rich glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTGTGCTCTGTAGCCGACATCACCTGCACCGGGACCATCTTCGTCA
Internal bar code:TACTAAACTTGAGCAATGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2485
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAACAGAAGAGTGGTGGA
Suggested primer 2:AACCAGAGCCACCTTACACG