Insertion junction: CLIP2.040335_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040335
Chromosome:chromosome 2
Location:2170099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089400 HRP2 (1 of 12) 2.7.11.18 - [Myosin light-chain] kinase / Smooth-muscle-myosin-light-chain kinase; Hydroxyproline-rich glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGTGCACGCACAGGTAGGGAGGGTACGGTACGTTCGAGTAAGCGGGG
Internal bar code:TACTAAACTTGAGCAATGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1312
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AACCAGAGCCACCTTACACG
Suggested primer 2:GCGAACAGAAGAGTGGTGGA