Insertion junction: CLIP2.040342_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040342
Chromosome:chromosome 13
Location:3316407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586100 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGACAGCTGCAGCGGCCCACAACCTGAGGTCGGAACCAGCGGCGGCGG
Internal bar code:TTTCTGAATTGTTGGGAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2546
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCGATCTCAGGTTGTGG
Suggested primer 2:CCACAACCTGAGATCGGCAT