Insertion junction: CLIP2.040342_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040342
Chromosome:chromosome 13
Location:3316409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586100 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTAGCGGCTGCGTGCCACCGCCGCTGGTGCCGACCTCAGGTTGTGGGCC
Internal bar code:AACGCGAAGCCGTCCTGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2611
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAACCTGAGATCGGCAT
Suggested primer 2:ATGCCGATCTCAGGTTGTGG