Insertion junction: CLIP2.040349_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040349
Chromosome:chromosome 3
Location:2481113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159200 UBC8 (1 of 2) K10589 - ubiquitin-protein ligase E3 C (UBE3C); Putative ubiquitin-protein ligase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAACTCCAGCAGTGCCAGGCCGCCCGGGATGCGCTCCGCCGCGGGGTT
Internal bar code:GTATTAGATCTAGTCGCAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2677
LEAP-Seq percent confirming:81.3187
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGCTGGACTTGCATACC
Suggested primer 2:AGGCAATATGGTGTGCAGCT