Insertion junction: CLIP2.040350_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040350
Chromosome:chromosome 12
Location:5754342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532500 (1 of 2) K03453 - bile acid:Na+ symporter, BASS family (TC.BASS); Sodium:bile acid symporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAATACCACCACGGTGGCCATGAAGGGCGTGTACAACTTGACGCGCGC
Internal bar code:AAATAGGTTTTTGGCACGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:653
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCTCTCCATCATGATGA
Suggested primer 2:TGTTGGTGCGTGCAATCTTG