Insertion junction: CLIP2.040351_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040351
Chromosome:chromosome 12
Location:2270736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508450 (1 of 1) IPR001680//IPR002893//IPR017986 - WD40 repeat // Zinc finger, MYND-type // WD40-repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCTGCTGCCGAGTCCGTATCCTCCCCGCCCCTGTCCCCGTCCGCAAG
Internal bar code:GTTAGATATCCGTTCTTAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:581
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATCACCCTGTCCATCCT
Suggested primer 2:ATGTTGGGGAGGCATGAGTG