Insertion junction: CLIP2.040356_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040356
Chromosome:chromosome 2
Location:1820999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087000 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGGTACCGCGACCTGTGCGCCGCGCACGGGCGGGCGGCGGGCATGAC
Internal bar code:TTCGTAGAGCAGGGCGGGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1037
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCCCGAGTCTGTATCTC
Suggested primer 2:CTCTCTAGCTTGCGGGCTAC