Insertion junction: CLIP2.040363_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040363
Chromosome:chromosome 3
Location:4403434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175050 TRP13 Transient receptor potential ion channel protein; (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGGCGCCCGGACAGGCGCCGTGTCCTTGCCGGCCAGCTGCTGCTGCG
Internal bar code:AAATTGCAAGTACGGGGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGGAGCTGTCTGGGTCG
Suggested primer 2:ATCATACCTAACTGCGCCGG