Insertion junction: CLIP2.040364_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040364
Chromosome:chromosome 3
Location:7889449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202600 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTTCGTTCCTGTTATCAATGCTGTACACTCTCGTGTCCCGCCGCGCT
Internal bar code:AATACCCCTGTGACATCCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1009
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CATTAGGTTTGAGCGCGCTC
Suggested primer 2:CCTGCTCGAACAAGTGGTCT