Insertion junction: CLIP2.040365_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040365
Chromosome:chromosome 11
Location:860382
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467648 RBL3 Rhomboid-like protease; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTGGTGGTCCTGGCGCGGCTGCCGGTGCCACCCGAGTAGTAATAAAG
Internal bar code:TGACGTGATTTGGAGCCATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACGCAGCGCTCAAAAT
Suggested primer 2:TGGTTCACCTACGTCGTGTG