Insertion junction: CLIP2.040366_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040366
Chromosome:chromosome 8
Location:3838049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381550 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATCAAACAGGAGTGCCAGCGCGGGGTTGTCGCGCGCGGGCGGGTTGG
Internal bar code:TTAGTATTTGGGCGATTAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1421
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TACTACCCCGCCAACCAGTA
Suggested primer 2:TTGCTACTGCCACATACGCA