Insertion junction: CLIP2.040370_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040370
Chromosome:chromosome 16
Location:5236480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684400 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACACAACGCGTGGGGGCGGCTCCGCTGAGGGAGCGGCGGCCGCCTGC
Internal bar code:CAGAAATCCAGGGCGAGAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1595
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCATGACTACCACCCGTA
Suggested primer 2:CTCCTCCATCTCCTCCCCAA