Insertion junction: CLIP2.040372_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040372
Chromosome:chromosome 16
Location:5849691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679750 (1 of 2) PTHR17630//PTHR17630:SF43 - DIENELACTONE HYDROLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCCAGCATTTCCCATTAGCCTGGTCAGCAGGCCGGGCTGCCACACG
Internal bar code:TACATTATTGCACATGCGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAACGTCAGGGAATCGGG
Suggested primer 2:TCCCACACGTTTTCCACACA