Insertion junction: CLIP2.040392_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040392
Chromosome:chromosome 6
Location:4096646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278226 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGCCGCTCATACTGGTGGCTGCACGAGGAACAGAGCGACAAGTACTC
Internal bar code:TAGTTGGCTGCCTTCATTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3759
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:128
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:128

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCGCATCGAAGCTGGAG
Suggested primer 2:GGGCTTGTGTGCGCTTAAAA