Insertion junction: CLIP2.040394_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040394
Chromosome:chromosome 7
Location:501665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315850 (1 of 2) IPR000104//IPR000945//IPR020683 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCAAGTGGTTGTGGGTGGTGCTAACCTGTACACGCAGCCGCCACCG
Internal bar code:TTCGACCTTAAAAGGGGAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1675
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACCCTGCTGAAAGACAC
Suggested primer 2:ACCACGGTAAACCTGCAGAG