Insertion junction: CLIP2.040410_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040410
Chromosome:chromosome 2
Location:5389106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113652 (1 of 2) PTHR24320:SF1 - 3-KETODIHYDROSPHINGOSINE REDUCTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACAAGAGGCGTGTGGGCTGAATGTGAGGTCTAAAAGCCCAATAAACA
Internal bar code:GTAGATTCCTCATGTGGTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2895
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGTTTGGAACACGTGC
Suggested primer 2:CCGTGGCGGTTTGTTTCATT