Insertion junction: CLIP2.040412_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040412
Chromosome:chromosome 7
Location:175337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313250 (1 of 1) 3.6.3.17//3.6.3.25 - Monosaccharide-transporting ATPase // Sulfate-transporting ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGCCTGGTTGCCAAAACCGCCCTCCAGGCCAGGACCAACATGATAG
Internal bar code:TGGGGGTCTTGGTAGTGGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:917
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AATTCGCGACGCACAAAACA
Suggested primer 2:CGACACCTTCTTCAGCAGGT