Insertion junction: CLIP2.040412_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040412
Chromosome:chromosome 7
Location:175337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313250 (1 of 1) 3.6.3.17//3.6.3.25 - Monosaccharide-transporting ATPase // Sulfate-transporting ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTAGGCAGTTTCTCAAGCCCAGTCGGGTCCTCATAGGGTTGTTGCCTC
Internal bar code:TGGGGGTCTTGGTAGTGGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:977
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CGACACCTTCTTCAGCAGGT
Suggested primer 2:AATTCGCGACGCACAAAACA