Insertion junction: CLIP2.040413_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040413
Chromosome:chromosome 1
Location:6926716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049750 (1 of 1) PTHR12714:SF11 - C-TERMINAL S-ISOPRENYLCYSTEINE CARBOXYL O-METHYLTRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTACCTGCAGGTAGCGTGGAGGTGTAGAGGCTGAGTCCCACGTAGCG
Internal bar code:GGATCACTATTAGCAGATGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2860
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAGCGAAAAAGGCAACA
Suggested primer 2:GAGCTGACTTGGCACTAGCA