Insertion junction: CLIP2.040417_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040417
Chromosome:chromosome 3
Location:3869298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170450 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGTCATGCGGATGGCTGGCCGAGGCGTGGCGGTGAGGCGGTGCGGCGA
Internal bar code:TTCATCGGGGGAAAATTTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1927
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGACAGCGAATGAGGCA
Suggested primer 2:TCATCGTCGTCGTCGTCATC