Insertion junction: CLIP2.040418_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040418
Chromosome:chromosome 6
Location:2361910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268100 HTB10 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCAAGGCCATGTCCATCATGAACAGCTTCATCAACGACATCTTTG
Internal bar code:AGACAGGACGTACTTCGAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:5790
LEAP-Seq percent confirming:91.0448
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTAAAGGCTGGCAGTGAG
Suggested primer 2:TTGCCCTTCTTCAGGTAGCG