Insertion junction: CLIP2.040420_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040420
Chromosome:chromosome 7
Location:4321336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341250 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACACGAGCGGCTGCGGCGGGCCATGCTTGACTCCCTCAAGAACTGG
Internal bar code:CCTTTCGATGGTTACCGCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:906
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGGGGCTAATGAGGTAC
Suggested primer 2:GGCTAGCCGTTACCGTACTC