Insertion junction: CLIP2.040423_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040423
Chromosome:chromosome 7
Location:4436884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343300 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCTCCCTGCTGCCAAGCCCTTGCACCCGTATGCCGCTTCCCCCGGC
Internal bar code:CTGCATGTCCGGCTCGAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3799
LEAP-Seq percent confirming:76.3889
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCTGATGGATGTGCTC
Suggested primer 2:CCTATACCATGTCACGCGCT