Insertion junction: CLIP2.040425_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040425
Chromosome:chromosome 4
Location:4070935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g233202 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCGTGTACTACGGCCGTTGCTGGGTTATGACACACATGTACGACAAA
Internal bar code:TATTTCAAAGGTGGATTTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3624
LEAP-Seq percent confirming:98.7952
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCGAAGAGGGAGAGAGT
Suggested primer 2:TCCTCACTCATAGCCTGGCT