Insertion junction: CLIP2.040427_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040427
Chromosome:chromosome 17
Location:3018827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719876 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCGGCAGTTGGCGGGGTGGTGGCGGCCGTGGCGGCGGCGCGGTCACT
Internal bar code:TTGGAGGCTCTAGTTTTCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:441
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCCCTTGATGAACAGCT
Suggested primer 2:GTGTCAGGGCCGAGTATCAG