Insertion junction: CLIP2.040433_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040433
Chromosome:chromosome 13
Location:2274082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578550 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGTGCACGTACAGGGAGTGGGCGGAGCAGGGCTCAGCGCTACAGTAC
Internal bar code:CTAACTTGATGTACTCAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:868
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGTTTGCATGTGCGT
Suggested primer 2:TGCAGCGAGGAGTTTGTGAT