Insertion junction: CLIP2.040434_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040434
Chromosome:chromosome 6
Location:8137941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATGAAATGTGGCCCCGTGCCCCACGCGCCTTCGCACCTGCAGAGGCC
Internal bar code:ATTACACTGATTGATTGACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1972
LEAP-Seq percent confirming:64.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGACCGGCGTATACTG
Suggested primer 2:AGCCATTTTCCCTCAGACCG