Insertion junction: CLIP2.040447_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040447
Chromosome:chromosome 16
Location:994920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648950 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCTGGTGGCCGCCTTCGCGCTGAGCTTTTTGATGCTGTAAGAGCGC
Internal bar code:AGGGGACGTACTTATGGCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1805
LEAP-Seq percent confirming:70.4545
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTGCTGAACATTACCGT
Suggested primer 2:TTACCAGTTGACTCGACCGC