Insertion junction: CLIP2.040450_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040450
Chromosome:chromosome 11
Location:940586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467658 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAGTCTTCCTTCCCTTGTGCGCATTAACATACACACACACATACAAA
Internal bar code:CGGAGTGGGCGTTTCGGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2576
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCTCGGACCTACGATC
Suggested primer 2:GGGTTTGGTACGACTGGAGG