Insertion junction: CLIP2.040452_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040452
Chromosome:chromosome 1
Location:5786560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041450 PPP4 (1 of 1) K17505 - protein phosphatase 1K [EC:3.1.3.16] (PPM1K, PP2CM); Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAATAAGTGTGAGTGCTCCTCCATCGGTGCTGGTGGGGCCTCATAAGT
Internal bar code:ATTGAAACAGAGCACTAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2998
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGAGGGAGAATTAGCGG
Suggested primer 2:GTAGCAACAGCCGTCCTTCT