Insertion junction: CLIP2.040454_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040454
Chromosome:chromosome 3
Location:2621773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160450 PF15,KATNB1,KAT2 (1 of 1) K18643 - katanin p80 WD40 repeat-containing subunit B1 (KATNB1); Katanin p80 subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGAAAAGCAGGAGGCGTGGAGGTGGCTGGTGTGATGCGTGGTTGGTG
Internal bar code:AATAGGGCATCGGTGGTCCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5491
LEAP-Seq percent confirming:97.5309
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTCTGACCTCAAGCCC
Suggested primer 2:GTTCCTGTCGGCCATGAAGA