Insertion junction: CLIP2.040455_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040455
Chromosome:chromosome 1
Location:7170991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051350 (1 of 3) PF13563 - 2'-5' RNA ligase superfamily (2_5_RNA_ligase2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCGATGGCCGCCGCACATCAACCTGCTGTACCCATTCCATCCGGAT
Internal bar code:GATCAGTACTTTTGCTTTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1778
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGTATCCCATGCTTGTT
Suggested primer 2:CAGGCCTGCATACCAAGGAA