Insertion junction: CLIP2.040457_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040457
Chromosome:chromosome 3
Location:2096416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156400 SMM8 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) 2.1.1.145 - Trans-aconitate 3-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAATGGTCGGCTGGAGGGTCGGCGGCAGCGGAGGAGGCGGAGGCAGC
Internal bar code:CCACAACGGTGAACTTGCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3060
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTCCCGGAAATGGCCCAT
Suggested primer 2:CACAAACTACAGACCGCCCT