Insertion junction: CLIP2.040458_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040458
Chromosome:chromosome 6
Location:2852879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272250 PHC27 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCCCATTGACTTTGTGGTGACCGTGCGCGGCCTGGTGCCGTCGCTGT
Internal bar code:AGTTCAACGACGACGGATCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2079
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTCCTCGTGTTCCACCA
Suggested primer 2:TTCTGCTGCATTGACGACCT