Insertion junction: CLIP2.040460_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040460
Chromosome:chromosome 13
Location:3726238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588495 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCATAAGACTTTTCGACGTTAACCAGACTAGAAATGCACGTGGACGCG
Internal bar code:AACCCTTAAAATTATAGTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:522
LEAP-Seq percent confirming:56.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGAGTTGCCCCAAGGT
Suggested primer 2:TTGTGAGGGGTGAGATGCAC