Insertion junction: CLIP2.040461_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040461
Chromosome:chromosome 16
Location:704966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691353 (1 of 14) PF13371 - Tetratricopeptide repeat (TPR_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGCGTAGGGTCCACGGCCAACAGCTTCTCGAAAGAGGATGAAGCAGC
Internal bar code:AAGCTGTTACAGACGTTTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:215
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTTTCAAACGCTGAACA
Suggested primer 2:CCTGTGCTCCCCTAGTTTGG