Insertion junction: CLIP2.040466_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040466
Chromosome:chromosome 3
Location:8221901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200200 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGACCGGAGGTTATTGCAAGCGGCATCTCAAAATTGTCAATGCTGGG
Internal bar code:AAGCGAGGATGGTTCCTTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:729
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATCTACGGCTGTGCTAT
Suggested primer 2:AGTCGTCACACGCGTTAGTT