Insertion junction: CLIP2.040471_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040471
Chromosome:chromosome 6
Location:5627037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287600 (1 of 7) PF12796//PF13637 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCAGCCACCCAGCCCAAGCCCACCTGCAGCAGGCGGCGGACCTCGC
Internal bar code:CTAGCGTATTGATACCGTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1669
LEAP-Seq percent confirming:74.4186
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCTTGGTACCGACTGAA
Suggested primer 2:TGTGTGAAGAGACGGTCTGC