Insertion junction: CLIP2.040475_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040475
Chromosome:chromosome 7
Location:811769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318250 HLM12 (1 of 2) IPR001214//IPR019734 - SET domain // Tetratricopeptide repeat; Histone-lysine N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGTAGCAGTCGAGCAGGTCCGCCTCCTGTGCTGCCTGCGGGTGATAG
Internal bar code:TGAGCCAACGAGCTCAACTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4919
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTACCTCAACCCGCTA
Suggested primer 2:GCTGCCTGGTTATGATTGCG