Insertion junction: CLIP2.040476_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040476
Chromosome:chromosome 4
Location:3336210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227251 (1 of 1) IPR006626//IPR008752//IPR011050//IPR029018 - Parallel beta-helix repeat // Peptidase M11, gametolysin // Pectin lyase fold/virulence factor // Chitobiase/beta-hexosaminidase domain 2-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGAGCGCTGAGGCCCCGTTGTCAATCTCTTCGCCTTGGGCGCATGG
Internal bar code:CGTTATTATGCTCGTAAACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5239
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:CTACTCACGCCGCTATCCTG
Suggested primer 2:GCGATGCATGAGCGTTGATT