Insertion junction: CLIP2.040478_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040478
Chromosome:chromosome 5
Location:2720008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240400 SOM2 (1 of 2) PTHR11746//PTHR11746:SF104 - O-METHYLTRANSFERASE // O-METHYLTRANSFERASE 10; S-adenosyl-L-methionine-dependent O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAACTCTTGCCGTACGACTACGCCTGCATACGAAGGGCTACCATGCAA
Internal bar code:GGGTACTAATCTCGTGGCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGAGGGTGAGGAGGAT
Suggested primer 2:GCACACACGTGTTTCCTTCC