Insertion junction: CLIP2.040479_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040479
Chromosome:chromosome 12
Location:7283292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801466 (1 of 2) IPR028992 - Hedgehog/Intein (Hint) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCGGGAGCAGCAAGTGCTTTGGCAGACAAGCTGCTGCATACAGTGG
Internal bar code:TTAGCGGGTCGCTTCGTGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4605
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCCAGCTCACTTGATGG
Suggested primer 2:GGGGACGTTCAACAAGTTGC