Insertion junction: CLIP2.040492_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040492
Chromosome:chromosome 12
Location:3099458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501000 PPT1,TPT22,TPT20 Putative UDP-GlcA transporter; (1 of 4) PTHR11132//PTHR11132:SF97 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTAGGGGGTGGATAGGAGGGGAGGGTTATGGGAAGGAGGGTGAGGTGG
Internal bar code:GGCGTGGGTCTCGGTTCATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3026
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTCGTGGCAGCAGTTTC
Suggested primer 2:GCTTCCTTTCACCTCCCCTC