Insertion junction: CLIP2.040496_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040496
Chromosome:chromosome 4
Location:2101000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219700 BBS9 (1 of 1) K19398 - Bardet-Biedl syndrome 9 protein (BBS9); Bardet-Biedl syndrome-9 associated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATACACACAACCCCCACCCATACACACACACCGCCCACCCCGCAGCAC
Internal bar code:AATGTGGGTTGGACTAGGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:42.5926
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGGGGTTGGGGTTTAG
Suggested primer 2:ACGCTCTCCTCCTTGCTCTA