Insertion junction: CLIP2.040501_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040501
Chromosome:chromosome 3
Location:9168914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199871 (1 of 1) PTHR23050:SF186 - CENTRIN-4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGTCCGCCATCTCCGCGTGCTCCCTCGACACACGTACTCAGAACGC
Internal bar code:GCCTTGTCTATCATTGCCCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3731
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGAAGACAGCACGCTAG
Suggested primer 2:TTAATGGCCGGGTTGCTGAT