Insertion junction: CLIP2.040509_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040509
Chromosome:chromosome 16
Location:7618299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684715 DCL2 Dicer-like protein; (1 of 4) 3.1.26.3 - Ribonuclease III / RNase III CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCACTGATGGCGGTACGGAGACCCCTGCAGATGCAGGCCCACCACCAG
Internal bar code:ACCGAGGTAAGGGGACCGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2381
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTCATGCCCGACGTTCT
Suggested primer 2:CAGTAGCAGCTCTAGACGCC