Insertion junction: CLIP2.040518_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040518
Chromosome:chromosome 10
Location:876131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423700 (1 of 1) PF07985 - SRR1 (SRR1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGGGCGCAGGGCGACGGTGTGCAGGGGATGGAGTAGGAATGGGGCGG
Internal bar code:AGTTTTCGACTGAATTGGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1570
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCAACTGAGCTTGGGGTG
Suggested primer 2:TAACAGAGGGAGGGACGGAG